Publications

2020
Ketty Margulis, Zer, Hagit , Lis, Hagar , Schoffman, Hanan , Murik, Omer , Shimakawa, Ginga , Krieger-Liszkay, Anja , and Keren, Nir . 2020. Over Expression Of The Cyanobacterial Pgr5-Homologue Leads To Pseudoreversion In A Gene Coding For A Putative Esterase In Synechocystis 6803. Life, 10, Pp. 10.3390/life10090174 . . Publisher's Version Abstract
Pgr5 proteins play a major direct role in cyclic electron flow paths in plants and eukaryotic phytoplankton. The genomes of many cyanobacterial species code for Pgr5-like proteins but their function is still uncertain. Here, we present evidence that supports a link between the Synechocystis sp. PCC6803 Pgr5-like protein and the regulation of intracellular redox balance. The knockout strain, pgr5KO, did not display substantial phenotypic response under our experimental conditions, confirming results obtained in earlier studies. However, the overexpression strain, pgr5OE, accumulated 2.5-fold more chlorophyll than the wild type and displayed increased content of photosystems matching the chlorophyll increase. As a result, electron transfer rates through the photosynthetic apparatus of pgr5OE increased, as did the amount of energy stored as glycogen. While, under photoautotrophic conditions, this metabolic difference had only minor effects, under mixotrophic conditions, pgr5OE cultures collapsed. Interestingly, this specific phenotype of pgr5OE mutants displayed a tendency for reverting, and cultures which previously collapsed in the presence of glucose were now able to survive. DNA sequencing of a pgr5OE strain revealed a second site suppression mutation in slr1916, a putative esterase associated with redox regulation. The phenotype of the slr1916 knockout is very similar to that of the strain reported here and to that of the pmgA regulator knockout. These data demonstrate that, in Synechocystis 6803, there is strong selection against overexpression of the Pgr5-like protein. The pseudoreversion event in a gene involved in redox regulation suggests a connection of the Pgr5-like protein to this network.
Or Ben-Zvi, Tamir, Raz , Keren, Nir , Tchernov, Dan , Berman-Frank, Ilana , Kolodny, Yuval , Benaltabet, Tal , Bavli, Harel , Friedman, Mor , Glanz-Idan, Noga , Traugott, Hadar , Loya, Yossi , and Eyal, Gal . 2020. Photophysiology Of A Mesophotic Coral 3 Years After Transplantation To A Shallow Environment. Coral Reefs, Pp. 1-11. . Publisher's Version Abstract
With shallow coral reefs suffering from anongoing rapid decline in many regions of the world, theinterest in studies on mesophotic coral ecosystems(30–150 m) is growing rapidly. While most photoaccli-mation responses in corals were documented within theupper 30 m of reefs, in the present study we transplantedfragments of a strictly mesophotic species from the RedSea,Euphyllia paradivisa, from 50 m to 5 m for a periodof 3 years. Following the retrieval of the corals, theirphysiological and photosynthetic properties of the coralswere tested. The transplanted corals presented evidence ofphotosynthetic acclimation to the shallow habitat, lowersensitivity to photoinhibition, and a high survival per-centage, while also demonstrating a reduced ability toutilize low light compared to their mesophotic counter-parts. This long-term successful transplantation from amesophotic depth to a shallow habitat has provided us withinsights regarding the ability of mesophotic corals and theirsymbionts to survive and withstand shallow environments,dominated by a completely different light regime. Theextensive characterization of the photobiology ofE.paradivisa, and its photoacclimation response to a high-light environment also demonstrates the plasticity of coralsand point out to mechanisms different than those reportedpreviously in shallower corals.
Reza Ranjbar Choubeh, Bar-Eyal, Leeat , Paltiel, Yossi , Keren, Nir , Struik, Paul C, and van Amerongen, Herbert . 2020. Photosystem Ii Core Quenching In Desiccated Leptolyngbya Ohadii. Photosynthesis Research, 143, Pp. 13-18. . Publisher's Version Abstract
Cyanobacteria living in the harsh environment of the desert have to protect themselves against high light intensity and prevent photodamage. These cyanobacteria are in a desiccated state during the largest part of the day when both temperature and light intensity are high. In the desiccated state, their photosynthetic activity is stopped, whereas upon rehydration the ability to perform photosynthesis is regained. Earlier reports indicate that light-induced excitations in Leptolyngbya ohadii are heavily quenched in the desiccated state, because of a loss of structural order of the light-harvesting phycobilisome structures (Bar Eyal et al. in Proc Natl Acad Sci 114:9481, 2017) and via the stably oxidized primary electron donor in photosystem I, namely P700+ (Bar Eyal et al. in Biochim Biophys Acta Bioenergy 1847:1267–1273, 2015). In this study, we use picosecond fluorescence experiments to demonstrate that a third protection mechanism exists, in which the core of photosystem II is quenched independently.
2019
Hanan Schoffman and Keren, Nir . 2019. Function Of The Isia Pigment&Ndash;Protein Complex In Vivo. Photosynthesis Research, 141, 3, Pp. 343-353.
2018
Sofia Shevtsov, Murik, Omer , Zer, Hagit , Weinstein, Ofir , Keren, Nir , Fragman-Sapir, Ori , and Ostersetzer-Biran, Oren . 2018. The Complete Plastid Genome Sequence And The Photosynthetic Activity Of The Putative Mycoheterotrophic Orchid Limodorum Abortivum. Israel Journal Of Plant Sciences, 1, aop, Pp. 1–20.
Noam Adir, Keren, Nir , Paltiel, Yossi , SHPERBERG-AVNI, ANAT , and Bar-Eyal, Leeat . 2018. Light Harvesting In Cyanobacteria: The Phycobilisomes. In Light Harvesting In Photosynthesis, Pp. 91–108. CRC Press.
Hagar Lis, Weiner, Tal , Pitt, Frances D, Keren, Nir , and Angert, Alon . 2018. Phosphate Uptake By Cyanobacteria Is Associated With Kinetic Fractionation Of Phosphate Oxygen Isotopes. Acs Earth And Space Chemistry, 3, 2, Pp. 233–239.
Nir Keren and Paltiel, Yossi . 2018. Photosynthetic Energy Transfer At The Quantum/Classical Border. Trends In Plant Science, 23, 6, Pp. 497–506.
Hagit Zer, Margulis, Ketty , Georg, Jens , Shotland, Yoram , Kostova, Gergana , Sultan, Laure D, Hess, Wolfgang R, and Keren, Nir . 2018. Resequencing Of A Mutant Bearing An Iron Starvation Recovery Phenotype Defines Slr1658 As A New Player In The Regulatory Network Of A Model Cyanobacterium. The Plant Journal, 93, 2, Pp. 235–245.
2017
Leeat Bar Eyal, Choubeh, Reza Ranjbar , Cohen, Eyal , Eisenberg, Ido , Tamburu, Carmen , Dorogi, Márta , Ünnep, Renata , Appavou, Marie-Sousai , Nevo, Reinat , Raviv, Uri , and others, . 2017. Changes In Aggregation States Of Light-Harvesting Complexes As A Mechanism For Modulating Energy Transfer In Desert Crust Cyanobacteria. Proceedings Of The National Academy Of Sciences, 114, 35, Pp. 9481–9486.
Ido Eisenberg, Harris, Dvir , Levi-Kalisman, Yael , Yochelis, Shira , Shemesh, Asaf , Ben-Nissan, Gili , Sharon, Michal , Raviv, Uri , Adir, Noam , Keren, Nir , and others, . 2017. Concentration-Based Self-Assembly Of Phycocyanin. Photosynthesis Research, 134, 1, Pp. 39–49.
Yael Kurzweil-Segev, Popov, Ivan , Eisenberg, Ido , Yochelis, Shira , Keren, Nir , Paltiel, Yossi , and Feldman, Yuri . 2017. Confined Water Dynamics In A Hydrated Photosynthetic Pigment–Protein Complex. Physical Chemistry Chemical Physics, 19, 41, Pp. 28063–28070.
Nadav Oren, Raanan, Hagai , Murik, Omer , Keren, Nir , and Kaplan, Aaron . 2017. Dawn Illumination Prepares Desert Cyanobacteria For Dehydration. Current Biology, 27, 19, Pp. R1056–R1057.
Noam Adir, Geifman-Shochat, Susana , Ohad, Dan G, Ohad, Nir , and Keren, Nir . 2017. Itzhak Ohad (1930–2016).
Aurélia Chenu, Keren, Nir , Paltiel, Yossi , Nevo, Reinat , Reich, Ziv , and Cao, Jianshu . 2017. Light Adaptation In Phycobilisome Antennas: Influence On The Rod Length And Structural Arrangement. The Journal Of Physical Chemistry B, 121, 39, Pp. 9196–9202.
Haim Treves, Murik, Omer , Kedem, Isaac , Eisenstadt, Doron , Meir, Sagit , Rogachev, Ilana , Szymanski, Jedrzej , Keren, Nir , Orf, Isabel , Tiburcio, Antonio F, and others, . 2017. Metabolic Flexibility Underpins Growth Capabilities Of The Fastest Growing Alga. Current Biology, 27, 16, Pp. 2559–2567.
Felipe Caycedo-Soler, Harris, Dvir , Yochelis, Shira , Huelga, Susana F, Plenio, Martin B, Adir, Noam , Keren, Nir , Paltiel, Yossi , and others, . 2017. Regulating The Energy Flow In A Cyanobacterial Light Harvesting Antenna Complex. Arxiv Preprint Arxiv:1707.00817.
Ido Eisenberg, Caycedo-Soler, Felipe , Harris, Dvir , Yochelis, Shira , Huelga, Susana F, Plenio, Martin B, Adir, Noam , Keren, Nir , and Paltiel, Yossi . 2017. Regulating The Energy Flow In A Cyanobacterial Light-Harvesting Antenna Complex. The Journal Of Physical Chemistry B, 121, 6, Pp. 1240–1247.
Fabian Brandenburg, Schoffman, Hanan , Kurz, Samantha , Krämer, Ute , Keren, Nir , Weber, Andreas PM , and Eisenhut, Marion . 2017. The Synechocystis Manganese Exporter Mnx Is Essential For Manganese Homeostasis In Cyanobacteria. Plant Physiology, 173, 3, Pp. 1798–1810.
Omer Murik, Oren, Nadav , Shotland, Yoram , Raanan, Hagai , Treves, Haim , Kedem, Isaac , Keren, Nir , Hagemann, Martin , Pade, Nadin , and Kaplan, Aaron . 2017. What Distinguishes Cyanobacteria Able To Revive After Desiccation From Those That Cannot: The Genome Aspect. Environmental Microbiology, 19, 2, Pp. 535–550.